Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEYSYPLNPDWTTEEMTIVVQFLEAIERAYEKGIDTLELKEKYRAFKQVVPAK--------GEEKRIGIDFEKASGYSAYKVMQLVKNATTSKIKMQP
3R66 Chain:A ((7-102))
-TTQIEVGPGATNATINFEAGILECYERFSWQRALDYPGQDRLHRLKRKLESRIKTHNKSEPENKRMSLEERKAIGVKMMKVLLF-MDPSAGIEGFEP
General information:
TITO was launched using:
RESULT:
Template:
3R66.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8516 for 483 contacts (17.6/contact) +
2D Compatibility (PS) -9618 + (NN) -4077 + (LL) 400
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -9179.0 ( -19.00 by residue)
QMean score : 0.359
(partial model without unconserved sides chains):
PDB file :
Tito_3R66.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R66-query.scw
PDB file :
Tito_Scwrl_3R66.pdb
: