Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINQVYRLVSER-QFEEANIEEA-LTEDVVVVRPTYLSICAADQRYYTGSRGKEMLSKKLPMALIHEGVGQVTYDATG--EFEIGTKVVMIPNTPTEDD---PVIAENYRRSSLFRS-----SGYDGLMQENVFMRRD-RVVRLPENMDMEVAA-YSELISVAFHAITRFKQKANANQSVFGVWGDGNLGFITCLLLKTIYPESKVIIFGKTQYKLDFF-S-FVDEAHLVDE--------IPEGLVIDNAFECAGGKGSQYAVEQIIDLIKPEGTISLLGVSENP-IEFNSRMVLEKGLTVFGSSRSGKEDFQNTVNFLSENERAVEYLSSLIGQRKVVRNLQDIIEAFETDLRNP-FGKTVMEWKV |
| 3JV7 Chain:A ((1-345)) | --MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQ--YAYGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIG-DLDPVAAAPLTDAGLTPYHAISRVLPL-LGPGSTAVVIGVGGLGHVGIQILRA-VSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGA---QSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMI-PFGASVVTPYWGTRSELMEVVALAR-AGR----LDI-HTETFT---LDEGPAAYRRLREGSIRGRGVVVP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JV7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169306 for 2763 contacts (-61.3/contact) +
2D Compatibility (PS) -33924 + (NN) -2129 + (LL) 2496
1D Compatibility (HY) -8800 + (ID) 3100
Total energy: -214763.0 ( -77.73 by residue)
QMean score : 0.445
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