Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEWTIIGWLLKFVKPLRGKMILAILLGIISNLSVIMISLIGTYGIIAVILQQPLNPYKWLFVMVACGVVRGLARYLEQYLNHDIAFRLLAIIRERIFATLRKLGPARLSGKKSGDLVAAITTDVEALEVFFAHTISPVFIALGTTIATVGFLASYDVGLAIILLVGQIMVGVVLPMISYKRNKKIGTAYQQAFVGLNQMVMENIASLQDIFQFKLGEERLRKLETQGEKLNRQYKKRIRQGSELQILGEWVLIGTATIILVLGSLSQLPLETVLIGTVLSLSSFGSVLALNALGTALLTTFASGKRLYALTEEKPVVLFNGQLELSDFESAELDKVSFSHDGKQP-LLNELSLALPKGKWLGIGGESGSGKSTLVKLLMRYWDP-DGQVKLNNNELPKITESSLHRLEGVMEQRTFLFEDTLGNNIRLGKKDATLEEVKEAARKAAIDTWIETLPEGYETIIGGQSRNLSDGERQRIGLARLFLHDAPLLLLDEPTSNLDYINEQAILNTLRSEIQDKTVLVISHRATTLDLAEEQLFIENGALKRAAK
2FGK Chain:C ((13-226))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDQATSALDYESEHVIMRNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIVEQGK


General information:
TITO was launched using:
RESULT:

Template: 2FGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78880 for 1614 contacts (-48.9/contact) +
2D Compatibility (PS) -22540 + (NN) -10112 + (LL) 29952
1D Compatibility (HY) -20400 + (ID) 3750
Total energy: -105730.0 ( -65.51 by residue)
QMean score : 0.464

(partial model without unconserved sides chains):
PDB file : Tito_2FGK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2FGK-query.scw
PDB file : Tito_Scwrl_2FGK.pdb: