Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELTKENFQKLDLIHLSLENRHSMSEIIDILSESYIEITQSGVV-KDYAYYKSLTTLG---D---SNLAIMEYDVKILDETKVLSYYKLKNLS--E-----NNYTMRSNIWIFENGSWKLTFHQGTRII
3CU3 Chain:A ((13-138))
--ADESAIRAFHRQMIDAWNRGSGEGFAAPFSETADFITFEGTHLKGRKEIAAFHQQAFDTVVKGTRLEGEVDFVRFVNSQLALMLVVIRVILPGQTETSASRDSLPLYVVTKGDEGWQIEGLLNTRK-
General information:
TITO was launched using:
RESULT:
Template:
3CU3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18733 for 774 contacts (-24.2/contact) +
2D Compatibility (PS) -11802 + (NN) -16 + (LL) 516
1D Compatibility (HY) 400 + (ID) 750
Total energy: -30385.0 ( -39.26 by residue)
QMean score : 0.304
(partial model without unconserved sides chains):
PDB file :
Tito_3CU3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CU3-query.scw
PDB file :
Tito_Scwrl_3CU3.pdb
: