Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKKMMVMGSVGCGKTTLCQKLHGYDIL-YKKTQAVE--------YFQEMIDTPGEFVQHRQLYSALTVTAADASVIAILQSVTEKKQTFSP--MFAS------IFAKPVIGIVTKVDLAESDKDIERAERELR----MAGAKHIFYISSVEETGIEELRAYLED
2X77 Chain:A ((23-179))
-IRVLMLGLDNAGKTSILYRLHLGDVVTTVPTVGVNLETLQYKNISFEVWDLGGQT----GVRPYWRCYFSDTDAVIYVVDSTDRDRMGVAKHELYALLDEDELRKSLLLIFANKQDLPDAA-SEAEIAEQLGVSSIMNRTWTIVKSSSKTGDGLVEGMDWLV-
General information:
TITO was launched using:
RESULT:
Template:
2X77.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57818 for 977 contacts (-59.2/contact) +
2D Compatibility (PS) -14521 + (NN) -410 + (LL) 620
1D Compatibility (HY) -5200 + (ID) 1250
Total energy: -78579.0 ( -80.43 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_2X77.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X77-query.scw
PDB file :
Tito_Scwrl_2X77.pdb
: