Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAAAAKNVGTVMSTHVIPRPHTDVEEILPVRVKSDE
4P2S Chain:B ((11-96))
--EALGMVETKGLTAAIEAADAMVASANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKILP-------
General information:
TITO was launched using:
RESULT:
Template:
4P2S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40254 for 680 contacts (-59.2/contact) +
2D Compatibility (PS) -9537 + (NN) -5400 + (LL) 876
1D Compatibility (HY) -9200 + (ID) 3600
Total energy: -67115.0 ( -98.70 by residue)
QMean score : 0.666
(partial model without unconserved sides chains):
PDB file :
Tito_4P2S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4P2S-query.scw
PDB file :
Tito_Scwrl_4P2S.pdb
: