Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VEREELKAIIKQIVADKLSGAETEIPIGVSNRHIHLTETDYNQLFPNEPIQVKKWLKQPGEFAAEQTLTVVSEKGELHRVRILGPLRKFSQVELSKTDARMLGMKIPIRVSGDIEGTPGIKLVSKHSEICLPKGAIVAKRHIHLPESVANEFGVKQGDEVSVLVGSEMRSLVLNHCTIRVNNQFIPEMHIDTDEANAADIAGTNFAKIIKS |
| 4AVR Chain:A ((1-94)) | ---------------------MDTGEASYYGSRHAGLRTASGERYNPNAMTAAHRTLPFGARVRVTNLD--NRRSVVVRINDRGPFRRGRIIDVSRKAAEGLGMIRSGVAPVRIESL---------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AVR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 24273 for 721 contacts (33.7/contact) +
2D Compatibility (PS) -9601 + (NN) -2172 + (LL) 9032
1D Compatibility (HY) 2000 + (ID) 700
Total energy: 22832.0 ( 31.67 by residue)
QMean score : 0.134
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