Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDILQTANERMEQLAALMNKDIEQKIPAGEKVKVGVDLGTSSIVFVVLDENN---VPLFGAFEFADAVRDGLVVNYRESVEVVTRLKNRAEKCLGISLTHASGAIPPGTV--------------------------------------------------------------------------GNNKKVVANVIESAGMEALYTIDEPTAAAAVLDL----QNGAVVDVGGGTTGISVFENGEVIYTADEPTGGTHMTLVLAGYYGVPVEEAEQNKRAQKDS--------------------------SEHFSVMRPVVEKMAEITRVHLEKS----PSEPLYIVGGASAYSQFKDTFESYLKMPVFQ-------PNYPQYVTPLGIAMSSGSENL |
| 3WQT Chain:A ((20-388)) | ------------------------------HYYVSIDIGSSSVKTIVGEKFHNGINVIGTGQTYTSGIKNGLIDDFDIARQAIKDTIKKASIASGVDIKEVFLKLPIIGTEVYDESNEIDFYEDTEINGSHIEKVLEGIREQETEVINVFPIRFIVDKENEVSDPKELIARHSLKVEAGVIAIQKSILINMIKCVEACGVDVLDVYSDAYNYGSILTATEKELGACVIDIGEDVTQVAFYERGELVDADSIEMAGRDITDDIAQGLNTSYETAEKVKHQYGHAFYDSASDQDIFTVEQVDSDETVQYTQKDLSDFIEARVEEIFFEVFDVLQDLGLTKVNGGFIVTGGSANLLGVKELLSDMVSEKVRIHTPSQMGIRKPEFSSAISTISSSIAF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99896 for 2127 contacts (-47.0/contact) +
2D Compatibility (PS) -26458 + (NN) -10474 + (LL) 2868
1D Compatibility (HY) -8400 + (ID) 1950
Total energy: -144310.0 ( -67.85 by residue)
QMean score : 0.464
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