Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNIQAMRKKVEVQIADLQNETDEIAEFNQAKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLEHVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGMRNQGQGSLKDFHIGYSSVPLLENGDVDFPLIAEKMTRKTKMIGIQRSRGYADRPSFTIDKIKEMIIFVKNINPEVIVFVDNCYGEFAEYLEPTEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALIDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLAPHVTAQAIKGARFTAAMLAEF-GVVAD--PTWDAPRTDLIQSISFHNK-EKMVAFAQAIQAASPVNAHVLPIGAYMPGYEDDVIMAAGTFIQGASLELTADGPIREPYQLYVQGGLTYEHVKIAVTRAIQKTL |
1GC0 Chain:A ((65-334)) | ---------------------------------------------------------PTLNLLEARMASLEGGEAGLA---LASGMGAITSTLWTLLRPGDEVLL-GNTLYGCTFAFL------HHGIGEFGVKLRHVDMA-----DLQALEAAMTPATRVIYFESP----ANPNMHMADIAGVAKIARKH--GATVVVDNTYCTPYL-QRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGA--VLSPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLARQPQVELIHYP-----QPGGMIAFELKGGIGAGRRFMNALQL------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123630 for 2071 contacts (-59.7/contact) +
2D Compatibility (PS) -26864 + (NN) -15250 + (LL) 9536
1D Compatibility (HY) -6400 + (ID) 2300
Total energy: -164908.0 ( -79.63 by residue)
QMean score : 0.365
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