Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------MFKKKIDWRDERGFTLVEMLIVLLVVSVLLL-------LTIPNIVSQSKSINDKGCEAFISMVQGQVQSYQLDKNSIPSVADLVSGGYLKANQKSCPNGNSIKIDSSGNVSEKK---- |
| 1KQF Chain:C ((2-217)) | SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKDIPWLLNIVEVLKGNEHKVADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFWVKGSIKGMIE----GKVSRRWAKKHHPRWYREIEKAEAKKESEEGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KQF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14220 for 595 contacts (23.9/contact) +
2D Compatibility (PS) -10368 + (NN) 2340 + (LL) 168
1D Compatibility (HY) -4800 + (ID) 650
Total energy: 910.0 ( 1.53 by residue)
QMean score : 0.157
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