Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKEIKYAFVTGASGEIGQAICMSLARAGWNLYLHYYQNKETVEKLLPLLQAEEVD----VILIQADFDDLASLTEIEKQVFQLDAFIHAAGHAHYSLFQDTTDTNIAELWNVHMFMPMRLIRTFMPKLMKSSQGRIIFISSIWGEVGASMEVAYSTVKGAQIAFCRALSQEVGLSGITVNAVTPGVVETKMMDQFSEEEKDNLRQEIPLNRFAQPEEIAETVAFLTSKKASYITGEVLRLNGGWLM
4BO5 Chain:B ((28-268))
-----KVALVTGASRGIGQAIALELGRLGA-VVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAG----------KDDEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMYM
General information:
TITO was launched using:
RESULT:
Template:
4BO5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -187802 for 1872 contacts (-100.3/contact) +
2D Compatibility (PS) -24754 + (NN) -7644 + (LL) 1092
1D Compatibility (HY) -14400 + (ID) 4150
Total energy: -237658.0 ( -126.95 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_4BO5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BO5-query.scw
PDB file :
Tito_Scwrl_4BO5.pdb
: