Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYELPKLPYTYDALEPNFDKETMEIHYTKHHNTYVTKLNEAVAGHPELASKSAEELVTNLDSVPEDIRGAVRNHGGGHANHTLFWSILSP--NGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVNDGKLEIVSTANQDSPLSD------GKTPVLGLDVWEHAYYLKFQNRRPEYIETFWNVINWDEANKRFDAAK
2AW9 Chain:B ((3-212))
-AYTLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEG-TEFADLPVEQLIQQLDRVPADKKGALRNNAGGHANHSMFWQIMGQGQ-GANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVKDGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWNVVNWDEVSKRYAAAK
General information:
TITO was launched using:
RESULT:
Template:
2AW9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72478 for 1610 contacts (-45.0/contact) +
2D Compatibility (PS) -20760 + (NN) -5265 + (LL) 172
1D Compatibility (HY) -21200 + (ID) 6150
Total energy: -125681.0 ( -78.06 by residue)
QMean score : 0.701
(partial model without unconserved sides chains):
PDB file :
Tito_2AW9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AW9-query.scw
PDB file :
Tito_Scwrl_2AW9.pdb
: