Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRLGSHVSMSGK-KMLLGASEEAASYGSNTFMIYTGAPQNTRRKPIEELNIEAGLEHMKAHDMADIV-VHAPYI-IN----IGNSVKPETFELGVNFLQSEIERTRALGAKQIVLHPGAHVG-EGADKGIKQIIQGLNEALIH--DQDVQIALETMAGK--GSECGRTFEELAQIIDGVTHNELLSVTFDTCHTHDAGYDIVNDFDGVLNQFDKIVGIDRLKVLHINDSKNERGAHKDRHANIGFGHIGFDALHYIVHHPQLADVPKILETPYVGGDKASKKAPYKWEIAMLKNGEFDPDLLNKIQNS |
| 1K77 Chain:A ((1-259)) | MPRFAANLSMMFTEVPFIERFAAARKAGFDAVEFLFPY----------NYSTLQIQKQLEQNHL-TLALFNTAPGDINAGEWGLS-ALPGREHEAHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKRILVEALSPGVKPHYLFSSQYQALAIVEEVA-RDNVFIQLDTFHAQKVDGNL----THLIRDYA-----GKYAHVQIAGLPD--------RHEPDDGEINYPWLFRLFDEVGYQG-WIGCEYKPRGL--------TEEGLGWFDAWRG----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1K77.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -119120 for 2072 contacts (-57.5/contact) +
2D Compatibility (PS) -26519 + (NN) -9407 + (LL) 2200
1D Compatibility (HY) -6400 + (ID) 1550
Total energy: -160796.0 ( -77.60 by residue)
QMean score : 0.468
|
|
|