Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEIIKISPRGYCYGVIDAMVIAKNASLDPNLPRPIHILGMIVHNKHVTDAFESIGIYTVDGANREEILDKITTGTVIFTAHGVSPSVKAKAVAKGLTTIDATCPDVLHTYNLILEKQAAGYEIIYIGKKGHPEPEGAYG--TAPD-VVHLVETKADIDALSLLS-DKIFVTNQTTMSKWDVADLMHYIKGKFPKAI--QHQEICMATQVRQEAVALQAKDADLTIVVGDPRSNNTARLAQVSIEKAGTKAYRIADITELDIEWIKDAKKVAVTAGASTPTQLVREVLLFLEQFDAADKTTWK-REHNQDFERILPKTKNKYMAEKRSQRLAHLKNGGS |
| 3SZO Chain:B ((13-318)) | MQILLANPRGFCAGVDRAISIVENAL--AIYGAPIYVRHEVVHNRYVVDSLRERGAIFI-----EQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELA-QRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENIVFE--VPK---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SZO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165163 for 2545 contacts (-64.9/contact) +
2D Compatibility (PS) -32375 + (NN) -9988 + (LL) 1680
1D Compatibility (HY) -17200 + (ID) 5700
Total energy: -228746.0 ( -89.88 by residue)
QMean score : 0.581
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