Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVSIIGATGYGGLELIRLLHQHSSVDIATLHSFSAQAETLATFYPHLKDLAVSPLEKINPTEIIEKSDTVFIATPSGIAKDIALPYVDAGLNVIDLSGDFRLKDRQLYEKWYGKSAAPTEYIGKAEYGLAEFRE--KKETTFIANPGCYATATLLGLAPLATNKLIDPTSIIVDAKSGISGAGKVPSASTHFTETNENMTLYKMNSHQHIPEIMQQLTKWDESIPAIQFSTSLIPITRGIFTTIYVKPKNPITQKELHKLYESTYDNAPFVRIQPEN----VYPTVKQVTASNYCDIGLAYNEKTNVITIVSVIDNLVKGAAGQAIQNLNIMANFAESDGLRFIPVYP |
| 2OZP Chain:A ((5-345)) | KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPP---EKLEPADILVLALPHGVFAREFDRYSALAPVLVDLSADFRLKDPELYRRYYGE-HPRPDLLGRFVYAVPELYREALKGADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAGGAEASPASHHPERAGSIRVYKPTGHRHTAEVVENLPG----RPEVHLTAIATDRVRGILMTAQCFVQDGWSERDVWQAYREAYAGEPFIRLVKQKKGVHRYPDPRFVQGTNYADIGFELEEDTGRLVVMTAIDNLVKGTAGHALQALNVRMGWPETLGLDFPGLHP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OZP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184188 for 2944 contacts (-62.6/contact) +
2D Compatibility (PS) -35707 + (NN) -13653 + (LL) -40
1D Compatibility (HY) -19600 + (ID) 5300
Total energy: -258488.0 ( -87.80 by residue)
QMean score : 0.467
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