Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LHILLTGATGFIGDHLVHELEKS-DH-ELYILTRQKLKNR----ANVH-YI-EWLNEDKLPNLEDLPVDVCINLAGAGLMDEKWTYDRKKVIVNSRIEATSALLSIVKKMKSKPKLWINASAIGAYTSSKSTIYLDTEENTYADNFLGKTVYEWEKTASAA-SDLGIRVVYARFGLVLGTNGG--------SFPVFEKLFQTYTGGRFGNGRQWYSWIHVDDVVAAILFIFDHEQ----INGVVNFTAPHPVQEKKFAERLGKKMHKPYKTPVPKKIIKFILGERAMTILDSQRAYPEKLM-SNHFEFRFETLQEALDDLLD |
| 2YY7 Chain:A ((3-309)) | PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVNALDFNQ-IEHLVEVHKITDIYLMAALLSA---TAEKNPAFAWDLNMNSLFHVLNLAKAK--KIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAAM-SFTPTEIANEIKKHIPEFTITYEPDFRQ-----KI--ADSWPASIDDSQAREDWDWKHTF-DLESMTKDMIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139421 for 2404 contacts (-58.0/contact) +
2D Compatibility (PS) -30680 + (NN) -8221 + (LL) 956
1D Compatibility (HY) -5600 + (ID) 2150
Total energy: -185116.0 ( -77.00 by residue)
QMean score : 0.390
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