Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTESNIPSFWAEKWQEHGYETPTEIQSAMYQPIKDGADVLAVSPTGTGKTVAYALPTLEKI----EAIPKTQWLVLAPSHELVMQITEVIRSWLPSDDLTVISLIGGANVKRQIEKLKKKPQIIVASPGRALELIKQKKIKMHEIKTITLDECDQLLRQENFKSTLEIVESAV-RDRQLTLVSATKLENPDMFFAQTENTPVMLEVTAKPEELTNVEHLYMDVESRDKATLLRRISHIKDMRGLVFVKDKPRMEILLEKLHYDKVKAAGIHGEIRKEKRKKYLDDFKKGTLTYLIVTDVAARGLDIEDLPYVIHYDLAASEKEYTHRSGRTGRMGKSGTVITFANPREIRTLKQYLTIHNLKGKQVRFYQGKLLDGAVPENKIAKKASRPPKQVQKSKKDDGKKPFRKDKPTGAAGGRKEKPTNSAKPTRNKPNKFNKKPNNFKKS |
2GXQ Chain:A ((14-184)) | -----------EALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLTPTRELALQVASELTAVAP--HLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSM-GFEEEVEALLSATPPSRQTLLFSAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2GXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -108728 for 1397 contacts (-77.8/contact) +
2D Compatibility (PS) -18197 + (NN) -10867 + (LL) 15948
1D Compatibility (HY) -10000 + (ID) 3050
Total energy: -134894.0 ( -96.56 by residue)
QMean score : 0.582
|
|
|