Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFAVIQFPGSNCDLDMLHAIRDSLGEEAEYIWHAE--TSL--AGFDAVLLPGGFSYGDYLRTGAIAKFSSIMPEVLRFAEMGKPVLGVCNGFQILTEIGLLPGALIRNNNLHFICKTVPLRVANASTMFTELYEE------GEIIQVPVAHGEGNYYCDDETLLKLKENNQIVFTYDSVNPNGSRADIAGIVNERGNVLGMMPHPERAVEEIIGGTDGLRLFESVVKAWKEEQVNA |
| 1GPM Chain:A ((8-227)) | HRILILDFGSQYT-QLVARRVREL-GVYCELWAWDVTEAQIRDFNPSGIILSGGPESTTEE---------NSPRAPQYVFEAGVPVFGVCYGMQTMAMQ--LGGHVEASNER--EFGYAQVEVVN-DSALVRGIEDALTADGKPLLDVWMSHGDKVT--------AI-PSDFITVAST---ESCPFAIMA---NEEKRFYGVQFHPEVTHT-----RQGMRMLERFVRDICQCE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GPM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67963 for 1661 contacts (-40.9/contact) +
2D Compatibility (PS) -19740 + (NN) -2526 + (LL) 2364
1D Compatibility (HY) -6000 + (ID) 1900
Total energy: -95765.0 ( -57.66 by residue)
QMean score : 0.309
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