Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LDKKFLLTNSTIGIIGGGQLGRMLALAAKAMGYRIIVLDPTADCPAAQVSDEQIIADYDDKVALRELSEKADVVTYEFENIDYDALKMTQNLVSVPQ--GSELLSITQDRILEKAYLESANINIAPYAVIVEQDEIENEIKSIGYPAVLKTAQGGYDGKGQVVIHDARDIETAARLLRYGSCVLEAWIPFEKEISVVVARNLDGQIETFPVAENVHVNNILHTTMVPADVAADVYEEAEEIARKLAEVLQLCGVLAVEMFVTKSGAIYVNELAPRPHNSGHFTIEACSISQFTQHIRAIVGLPLVKPELLKPAVMINILGQHVDAVNKQMVNYPHWFVHYYGKKEAKINRKMGHVTVLADEPKAVIQDLEETQIWK |
| 3ETJ Chain:B ((4-333)) | -----------VCVLGNGQLGRMLRQAGEPLG--IAVWPVGLDAEPAAVPFQQ------------------SVITAEIERWPETAL--TRQLARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAERSEWPAVFDRLGELAIVKRRTGG----GQWRLRANETEQLPAEC--YGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQARAEEMLSAIMQELGYVGVMAMECFVTPQG-LLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNNPSVMINLIGSD---VNYDWLKLPLVHLHWY-DKEVRPGRKVGHLNLTDSDTSRLTATLE------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ETJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199363 for 2619 contacts (-76.1/contact) +
2D Compatibility (PS) -35241 + (NN) -8314 + (LL) 3944
1D Compatibility (HY) -24400 + (ID) 5850
Total energy: -269224.0 ( -102.80 by residue)
QMean score : 0.454
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