Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEELILSIV-KPLVDHPEDVVITPEETDTSLTY------KLSVSKEDMGRVIGKQG-----------------RIAKAIRTLVYAVGSKNDKKIRLEIIE----------
1Y9L Chain:A ((6-115))
EKEWHIVPVSKDYFSIPNDLLWSFNTTNKSINVYSKCISGKAVYSFNAGKFMGNFNVKEVDGCFMDAQKIAIDKLFSMLKDGVVLKGNKINDTILIEKDGEVKLKLIRGI
General information:
TITO was launched using:
RESULT:
Template:
1Y9L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17879 for 412 contacts (-43.4/contact) +
2D Compatibility (PS) -8252 + (NN) -3320 + (LL) 0
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -34201.0 ( -83.01 by residue)
QMean score : 0.271
(partial model without unconserved sides chains):
PDB file :
Tito_1Y9L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y9L-query.scw
PDB file :
Tito_Scwrl_1Y9L.pdb
: