Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKIAFVFPGQGAQKVGMGQDVAAEYPEAKKIYDDADERLGFSITEIITEGPIELLTKSENAQPALVSTSVAILRALET-YGVKADYVAGHSLGEYSALVAGGFLEASDAIYLVRKRGELMEAAVPNGAGAMAAVLGVDRETLKTITEEVTKEGDAVQLANLNCPGQIVISGTTAGVEKAGEKAKESGAKRVLPLAVSGPFHSSLMEPAALAFRDVLAEVKISDGQIPVVNNVDAKETTDKSEISDKLIKQIYSPVLWEDIVEELIKNGVDTFVEIGSGKVLAGLIKKINRDVTVLSAGDAESVKSVAATLKGE |
3K89 Chain:A ((4-312)) | -STLAFVFPGQGSQSLGMLAELSELHPQIRETFAEASEGAGVDLWALSQGGPEEMLNRTEYTQPALLAAGVAVWRLWTAQRGQRPALLAGHSLGEYTALVAAGVLSLHDGAHLVRLRGQFMQAAAPAGVGAMAAVLGAEDAVVLEVCAEAA-GSQVVVPANFNSPGQIVIGGDAAAVDRALALLAERGVRKAVKLAVSVPSHTPLMRDAANQLGEAMAGLSWHAPQIPVVQNVDARVHDGSAAIRQALVEQLYLPVQWTGCVQALASQGITRIAECGPGKVLSGLIKRIDKSLDARPLATPADYAGALDAW--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3K89.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -187115 for 2880 contacts (-65.0/contact) +
2D Compatibility (PS) -33857 + (NN) -13247 + (LL) 268
1D Compatibility (HY) -20800 + (ID) 5950
Total energy: -260701.0 ( -90.52 by residue)
QMean score : 0.604
|
|
|