Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQGKNILLAVSGGIAVYKAVALTSKLTQAGANVKVMMTAHAQEFVPPLSFQVLSKNDVYTD--TFDEK--KSSVVAHIDLADWADLVIVAPATANVIGKMANGIADDMVTTTILAT--EAPVWVAPAMNVHMIQHPAVIRNINRLYADGVRFIEPEEGYLACGYVGRGRLEEPEKIVLRIAEFFQEDKNLLQGKNVLVTAGATREKLDPVRYFTNHSTGKMGFSIAESAARHGANVTLITTSKALPVPHGVEAIYVESAEEMHQAVNERKVSQDIFVMTAAVADYTPAQVSDQKIKKQPGDFTIAMKRTKDILLEIGQHKTSEQVVIGFAAETENVEANARKKLTSKNADMIVANNISEAGAGFSGDTNIVTFYRKDGSSEALPILDKKEVAEHIIKEAANFLRK |
1MVL Chain:A ((19-200)) | --KPRVLLAASGSVAAIKFGNLCHCFT-EWAEVRAVVTKSSLHFLDKLSLPQE--VTLYTDEDEWSSWNKIGDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIK---------NGAMAEPSLIYSTVRLFWE-------SQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1MVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -121184 for 1406 contacts (-86.2/contact) +
2D Compatibility (PS) -17959 + (NN) -4021 + (LL) 16580
1D Compatibility (HY) -13600 + (ID) 2800
Total energy: -142984.0 ( -101.70 by residue)
QMean score : 0.507
|
|
|