Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VLQTEMKVIQQTEIADKVYELILTGECVAGMSPGQFLMLKPSRSDLLMRRPISICSYDKTAKTCILLYRVE--GDGTRDFSKLSEGDTIDVLGPLGKGFDIDTTPAPKTALLIGGGIGVPPMYQLGKELAEK--GVQVMFVNGFQSAKDSFYAQEMAEYG-----TVH--IA--TVDGSLGTQGFVTDIT-KNF----P-----EEPDVIYSCGPKAMLQAVKASFPETKTYLSLEERMACGIGACYACVCPKADDTNKQFKVCEDGPVFRADEVKL |
1FDR Chain:A ((3-228)) | -DWVTGKVTKVQNWTDALFSLTVHAP-VLPFTAGQFTKLGLEI---RVQRAYSYVNSPDN-PDLEFYLVTVPDGKLSPRLAALKPGDEVQVVSEAAGFFVLDEVPHCETLWMLATGTAIGPYLSILRLGKDLDRFKNLVLVHAARYAADLSYLPLMQELEKRYEGKLRIQTVVSRETAAGSLTGRIPALIESGELESTIGLPMNKETSHVMLCGNPQMVRDTQQLLKET------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FDR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107041 for 1555 contacts (-68.8/contact) +
2D Compatibility (PS) -21685 + (NN) -7889 + (LL) 3572
1D Compatibility (HY) -10000 + (ID) 1750
Total energy: -144793.0 ( -93.11 by residue)
QMean score : 0.459
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