Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKIVLLLALITVVLTVGACSDNKKETEEKANKTEEESATFLTTISTKDFKQKMADKTTGFVYVGRPTCEDCQAFQPILKKELKKRQPDQKMAYYNTDKASEKSRDNMIALLEKMDIDSVPTMVYLKDGKVASTYAATDEPAKLTNWMNKVSGEVSE
2E0Q Chain:A ((40-139))
--------------------------------------------LDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYP-QVGFGKLNSDENP--------DIAARYGVMSLPTVIFFKDGEPVDEIIGAVPREEIEIRIKNLLG----
General information:
TITO was launched using:
RESULT:
Template:
2E0Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43540 for 716 contacts (-60.8/contact) +
2D Compatibility (PS) -10998 + (NN) -9006 + (LL) 4840
1D Compatibility (HY) -7600 + (ID) 850
Total energy: -67154.0 ( -93.79 by residue)
QMean score : 0.671
(partial model without unconserved sides chains):
PDB file :
Tito_2E0Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E0Q-query.scw
PDB file :
Tito_Scwrl_2E0Q.pdb
: