Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPNILDSLWNSMALFLSALFFHGMALRSIREKKPAWFQIKFANEFINYALGIYYGLLGVYFIIRGLPGTDSGIYTDMLLNILIVLHLFSSAGPATIALLLIVSGKLFLGDALFANLIYVFLIIGFHFVCMEVAKLRLSSVQKVVLVKLSAIPLMLFYLHQKIHLAYTMNDLPVWILYFLVSFFITFIIVSAAYYIDTSNKLIYDLQQSTILDPLTGLTNFRHFENAFDAAFNHATLKKSNLSVIIIDIDYFKRVNDTYGHLVGNGVLSTFSQMLLKISFPPNTVISRIGGEEFAIILPNINVSETEHLAEKIRRKVEKIDVPIV--ASGSVITISAGIANYDGRNYPSANELLNAADQALYNAKRNGRNQVHIRETEPVI |
1W25 Chain:A ((284-454)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLAS-NVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSATAG-EGDTPEALLKRADEGVYQAKASGRNAVVGKAAH--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107537 for 1323 contacts (-81.3/contact) +
2D Compatibility (PS) -18663 + (NN) -12164 + (LL) 19556
1D Compatibility (HY) -10800 + (ID) 2850
Total energy: -132458.0 ( -100.12 by residue)
QMean score : 0.597
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