Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTSRKIIHIDMDAFYASVEQRDHPEFRGKPLII---GGDPNKRGVVATCSYEARKFGVHSAMPTRQAAKLCPNGIFIHGNMAHYVEVSNQIREIFSRYTDIIEPLSLDEAYLDVTENKKGMKSATMVAREIQQTIYQELGLTASAGVSFNKFIAKIASDFKKPAGITVVTPEEAEAFLEQIPVTKFYGVGKVTAEKLHRLGIETGADLKKWSEWDLIREL--HKHGYHLYRHVRGRSNNIVNPHRDRKSVGKETTFEFNVLDSRVLEQSLMQFAKKVEERLIKLQKHGKTVVLKLRYSDFTTITKRLTLNEYTNDASQIYQAAALLLIESYTGQDSIRLIGLTVTNLKPVYFENLRLEGL |
| 4TQS Chain:B ((9-285)) | ------VLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSI-EFDKLKGMIGEAKAKYLISLARDEYNEPIR-TRVRKSIGRIVTMKRN---SRNLEEIKPYLFRAIEESYYKLDKR------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122550 for 2001 contacts (-61.2/contact) +
2D Compatibility (PS) -29912 + (NN) -14262 + (LL) 6232
1D Compatibility (HY) -20800 + (ID) 4800
Total energy: -186092.0 ( -93.00 by residue)
QMean score : 0.537
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