Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDKIAVIPGTFDPITNGHLDIIERAAKIFDVLYVSVLNNSSKKPLFTIEERMEMIRQVTAHLPNVQVESASGLTVDYAATRGATAIVRGLRAVSDFEYEMQIASMNRTLNADIETFFVMTNTKYSFLSSSMVKEVAQYQGDISELVPEIVNKAVQAKFK
1B6T Chain:B ((3-158))
---KRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVALAQQATAHLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKL-
General information:
TITO was launched using:
RESULT:
Template:
1B6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101680 for 1242 contacts (-81.9/contact) +
2D Compatibility (PS) -16890 + (NN) -7420 + (LL) 24
1D Compatibility (HY) -16800 + (ID) 4050
Total energy: -146816.0 ( -118.21 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_1B6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B6T-query.scw
PDB file :
Tito_Scwrl_1B6T.pdb
: