Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSDLFTTIKGQVTGKNVRIVLPEGTDERIVGAAARLQKENIVKPILLGNKAEIEAKAKEIGVSVEGIAIHEPATDPLFDELVAAFVERR-KGKATEEAARKMLVDPNYFGTMLVYTGKAEGLVSGAAHSTGDTVRPALQIIKTKPGVSKVAGAMIMVRG------EERYLFSDVAINIAPVAADLAENAIVSAETAE-IFGIDPRVAMLSFSTKGSAKSDETEKVVEATALAKEKAPELTLDGEFQFDAAFVPTVAEKKAPGSVIKGDANVFIFPSLEAGNIGYKIAQRLGNFEAVGPILQGLNAPVNDLSRGCNTDDVYNLTLITAAQAVNK
2AF4 Chain:C ((2-330))-VTFLEKISERAKKLNKTIALPETEDIRTLQAAAKILERGIADIVLVGNEADIKALAGDLDL--SKAKIVDPKTYEKKDEYINAFYELRKHKGITLENAAEIMSDYVYFAVMMAKLGEVDGVVSGAAHSSSDTLRPAVQIVKTAKGAALASAFFIISVPDCEYGSDGTFLFADSGMVEMPSVEDVANIAVISAKTFELLVQDVPKVAMLSYSTKGSAKSKLTEATIASTKLAQELAPDIAIDGELQVDAAIVPKVAASKAPGSPVAGKANVFIFPDLNCGNIAYKIAQRLAKAEAYGPITQGLAKPINDLSRGCSDEDIVGAVAITCVQAAA-


General information:
TITO was launched using:
RESULT:

Template: 2AF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -144130 for 2876 contacts (-50.1/contact) +
2D Compatibility (PS) -34640 + (NN) -13742 + (LL) 436
1D Compatibility (HY) -20000 + (ID) 7200
Total energy: -219276.0 ( -76.24 by residue)
QMean score : 0.552

(partial model without unconserved sides chains):
PDB file : Tito_2AF4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2AF4-query.scw
PDB file : Tito_Scwrl_2AF4.pdb: