Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDRILNNKWSIRIIALLLAAILFTSVNANNNNATTFSTTSSSDSEVIENVPVKVYYDKTNLYISGIPETVTVTLSGPRSIVQSAKA-QQDFTVYADLKNASIGTQEVKLQVKDVSDRLKVKVNPATVNVNVQEKVTKKFSVDVELSKSVVADGYQAGTPIIDPKKVSITGAKDTIEQIAYVKATLESDGKHKSEFTDKATVSVFDSNLNKLDVEVNPQEVEVTVPVEKVGKSVPVKIKQEGTPESDIEISSMTPDKSEVVVVGDDAVLEKIKEIEIPIDVSKIKADTVKEVTVPVPTGAKSVQPTTIEVKIKTVKKSEANNNPTTSDSNNQDTDTTDNNTDDSGDNNTKISKSFSNMQVYMSGLKNTFDAQMITPANGKVSVTITGEKKTVDGIAAKDLSVIANLSKSKAGSYSIPLELNGLPDNVAYVINPRQADFIITDKEASIEVPSKST |
| 2KQ1 Chain:A ((1-119)) | ------------------------------------MPTFDHGNLSLGELELTVLYDEERYDIVEQTETVQVDLEGPRGVLTVFRFARPSYEVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMINLEHHHHHH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34792 for 682 contacts (-51.0/contact) +
2D Compatibility (PS) -12774 + (NN) -489 + (LL) 18960
1D Compatibility (HY) -7600 + (ID) 1450
Total energy: -38145.0 ( -55.93 by residue)
QMean score : 0.583
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