Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIIGIAACTSGIAHTYIAKEKLTKAGLALGHNVHIETQGTIGIEDELSAEQVKNADVVIIAADIKISGKDRF------KGKRVVEIPTDLA-IKAPKQIINKIDKEINN
2L2Q Chain:A ((6-104))
---NILLVCGAGMSTSMLVQ-RIEKYAKSKNINATIEAIAETRLSEV-----VDRFDVVLLAPQSRFN-KKRLEEITKPKGIPIEIINTIDYGTMNGEKVLQLAINAFN-
General information:
TITO was launched using:
RESULT:
Template:
2L2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45763 for 631 contacts (-72.5/contact) +
2D Compatibility (PS) -9999 + (NN) -72 + (LL) 700
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -60034.0 ( -95.14 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_2L2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L2Q-query.scw
PDB file :
Tito_Scwrl_2L2Q.pdb
: