Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKMAVISLVLLLFLVGCGKEEAAQKPEQKTDKEPKIVATTVAITEIMDKLDLPLVGIPSSSK---KLP---KRYADVKETGSPMGPDLEIIRMLKPDMVLSTKTLEADLKSGFEGADLEADFLDFTSIASMQTEIKNLGAKFDRIEEATKLNKDLTSDIDQVKSNVAKK--KKPTVLILMGVPGSYLVVTEHAYIGDLVKLAGGENVIKDQ--KVEYLASNTEYLQSANPDIILRAAHGMPA-EVVKMFDEEFKTNDIWKHFDAVKNNRVYDLDENLFGMT-ASLNAPEALKEMEKMLYDN |
| 3TNY Chain:A ((27-296)) | --------------------------KTEVPANPKRVVILTNEGTEALLELGVKPVGAVKSWTGDPWYPHIKDKMKDVKVVGDEGQVNVETIASLKPDLIIGNKMRHEKVYEQLKAIA-PTVFSET-LRGEWKDNFKFYAKALNKEKEGQKVVADYESRMKDLKGKLGDKVNQEISMVRFM--PGDVRIYHGDTFSGVILKELGFKRPGDQNKDDFAERNVSKERISAMDGDVLFYFTFDKGNEKKGSELEKEYINDPLFKNLNAVKNGKAYKVDDVIWNTAGGVIAANLLLDDIEKRFV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47977 for 2127 contacts (-22.6/contact) +
2D Compatibility (PS) -27437 + (NN) -11116 + (LL) 3036
1D Compatibility (HY) -11200 + (ID) 2400
Total energy: -97094.0 ( -45.65 by residue)
QMean score : 0.486
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