Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKVFITTGTEHYLRQLMANYTGGNVTLLQNFSQSLLYQESTGEKLFQEGAEYRVLQSSGSIKGFGVVVFEYIHLRDEEIPIFLQMYQRASLHFSETPGLQSTKLTKAMNM-NKFLIISFWDSEVFFHDWKKSPLSKEITNIMRKNNTQSGFSHEDIYHYPEFSHDAK |
3HX9 Chain:A ((3-77)) | ------------------------------------------------------------------VVKINAIEVPAGAGPELEKRFAHRAHAVENSPGFLGFQLLRPVKGEERYFVVTHWESDEAFQAWANGPAIAAHAG--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HX9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30368 for 419 contacts (-72.5/contact) +
2D Compatibility (PS) -7500 + (NN) 917 + (LL) 5500
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -34051.0 ( -81.27 by residue)
QMean score : 0.308
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