Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNANGNLKKCPITISSYTLGTEVSFPKRVKVAAENGFDGIGL----RAENYVDALAAGLTDEDMLRILDEHNMKVTEVEYITQWGTA-----EDRTAEQQKKEQTTFHMARLFGVKHINC-------GLLEKIPEEQIIVALGELCDRAEE--LIIGLEFMPYSGVADLQAAWRVAEACGRDNAQLICDTWHWARANQTAESIKNVPADRIVSIQLCDVHETPYKELREESLHDRLAPGEGYGDTVGFAKILKEHGVNPRVMGVEVISDSMVATGLEYAALKVYNATKKVLDEAWPEISPR |
| 3CQJ Chain:A ((16-291)) | ---------QIPLGIYEKALPAGECWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMNSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKNVP---------FGEGVVDFERCFETLKQSGYCGPYL-IEMWSET------AEDPAAEVAKARDWVKARMAKAGM- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112187 for 2076 contacts (-54.0/contact) +
2D Compatibility (PS) -28314 + (NN) -12137 + (LL) 1504
1D Compatibility (HY) -12800 + (ID) 1950
Total energy: -165884.0 ( -79.91 by residue)
QMean score : 0.506
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