Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNYKQFYTYDENGDYLETILVFEDEKGLINQPKNSTNIEPSIIENGIARAMYYPSWDGSIWKEDKKRWESENPIIPAEKTEIEKLREELLLTQEALAALFESNLG
2Y5P Chain:A ((3-74))
--MVYTVSYDVDGTVIKTKVEAG---TRITAPKPPTK-----------QGYVFKGWYTE--KNGGHEWNFNTDYMSGND--------------FTLYAVFKAET-
General information:
TITO was launched using:
RESULT:
Template:
2Y5P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5055 for 425 contacts (11.9/contact) +
2D Compatibility (PS) -7338 + (NN) -49 + (LL) 2868
1D Compatibility (HY) -4400 + (ID) 700
Total energy: -4564.0 ( -10.74 by residue)
QMean score : 0.218
(partial model without unconserved sides chains):
PDB file :
Tito_2Y5P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Y5P-query.scw
PDB file :
Tito_Scwrl_2Y5P.pdb
: