Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LSQFDEVIPRIGTNSEKWDGAEELFGRKDIIPMWVADMDFRAPKPVLDAFQRQIDHGIFGYST-KSKALVEAVIDWNKEQHQFEIDPSTLFFNGAVVPTISLAIRSLTNEGDAVLMVSPIYPPFFNVTKATERKVVMSPLIYENRQYRMDFNDLEKRMKEENVKLFLLCNPQNPGGRCFTKEELVELAKLCEKYQIPIVSDEIHADLVMKNHKHVPMMVAAPFYQDQIITLMAATKTFNLAAIKASYYIITNKDYQTRFAAEQKYATTNGL---NVFGIVGTEAAYRHGAPWLKELKEYIYSNYEYVKAELEKEVPEVGVTDLEATYLMWLDCRALPKDEKTIYTDLIEA-GVGVQMGSGFGHSGKGFVRFNIACPKETLEKSVKLLIQGLKK |
1D2F Chain:B ((4-387)) | ---FSKVV---------------------LLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVA---RGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALK--GRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260339 for 3001 contacts (-86.8/contact) +
2D Compatibility (PS) -38158 + (NN) -12854 + (LL) 1240
1D Compatibility (HY) -34000 + (ID) 5950
Total energy: -350061.0 ( -116.65 by residue)
QMean score : 0.545
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