Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYPQLSKEVAPNEIEAEMITNRGTIRIKLFPEIAPKTVENFVTHS-------KNG---YYDGLIFHRVIPEFMIQGGD-PDGRGTGGESIWGESFEDEFSTEAFNLRGALSMANAGPNTNGSQFFIVQKPDMPADMLGQMEQAGFPVEVIEAYKQGGTPWLDGRHTVFGHVIEGMDVVDEIANLPTGMQDKPVNDVVIEKINIK
4HY7 Chain:A ((18-149))
-----------------------GRIVMELYKDAVPRTVENFRALCTGEKGVGKSGKPLHYKGSAFHRVIPDFMCQGGDFTRGNGTGGESIYGEKFADEKFVHKHTKPGILSMANAGPNTNGSQFFICTVP---------------------------CNWLDGKHVVFGEVVEGMDVVKNI-----------------------
General information:
TITO was launched using:
RESULT:
Template:
4HY7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46830 for 899 contacts (-52.1/contact) +
2D Compatibility (PS) -12786 + (NN) -6202 + (LL) 4908
1D Compatibility (HY) -9600 + (ID) 3650
Total energy: -74160.0 ( -82.49 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_4HY7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HY7-query.scw
PDB file :
Tito_Scwrl_4HY7.pdb
: