Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VEAKLQVGVLGFGTVGSGVIHILEEHQEKISQVTGYNISVKKVLVRDLEKNRRYETKGFELTTNPSDVLDDPEIAVVVEVMGS-ITTAREYILQALKAGKHVVTANKDLIALHGDELVAVAQANNCDLFYEASVAGGIPILRTIVNSLAADKIQKVMGIVNGTTNFMLTKMTTEKKSYEDVLAEAQALGFAESDPTNDVDGIDAARKMVIMTRLAFGMNVNLDNVETNGIRGISPEDIEVAYQLGYKIKLVGTAEETNGTVNVNVGPVLLPKAHPLAGVNYENNAVFVTGAAVGETMFYGPGAGELPTATSVVSDLITVAKNSRLGTNGNAFNSYKHETKHTPKEQVFSKYYLRLTMDDKTGTFLKLTQIFAEAGVGFDKILQQPYDDFTATVVIVTHSTSQAQLEQAIARVKDEPEMQMLAKYSVVEG |
2EJW Chain:A ((1-312)) | -MEALKIALLGGGTVGSAFYNLVLERAEELS-AFGVVPRFLGVLVRDPRKPRA-I-PQ-ELLRA-E-PFDLLEADLVVEAMGGVEA-PLRLVLPALEAGIPLITANKALLAEAWESLRPFAEEGL--IYHEASVMAGTPALSFLETLR-GSELLELHGILNGTTLYILQEME-KGRTYAEALLEAQRLGYAEADPTLDVEGIDAAHKLTLLARLLVDPGFPFAEVEAQGIARLTPEVLQKAEARGERVRLVASLFGEGGRWRAAVAPRRLPQDHPLARARG--NALWVRARPLGEAFVTGPGAGGGATASGLFADLLRFLSGAPGH------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186240 for 2712 contacts (-68.7/contact) +
2D Compatibility (PS) -33901 + (NN) -9980 + (LL) 8288
1D Compatibility (HY) -19200 + (ID) 5550
Total energy: -246583.0 ( -90.92 by residue)
QMean score : 0.501
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