Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKLSIAYLESLTIKDIYSLAKEHKIAYYSKLTKRELIFALLKSNAEKEGFFFMEGVLEIIPNEGFGFLRPIN--YSSSSEDIYISASQIRRFELRTGDRVSGKVRPPKENERYFGLLHVEAVNGENPEVAKERVHFPGLTPLYPDRQIHLETEKYPISTRTIDLIAPIGFGQRGLIVAPPKAGKTVLLKEIANAITTNHPDTELIVLLIDERPEEVTDIERSVKADVVSSTFDEVPENHIKVAELVLERAMRLVEQKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRQLAERRVFPAIDMRRSGTRKEELLLSKERLEQLWKIRKAMPKQGDGLDISERFVRYLKKTDNNEAFYELLQEEMFKK |
| 1XPO Chain:D ((1-417)) | ---MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEIL-QDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPEN--NKILFENLTPLHANSRLRM-GSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPA---VLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGE-IDAMEFLINKLAMTKTNDDFFEMMK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202539 for 3278 contacts (-61.8/contact) +
2D Compatibility (PS) -43327 + (NN) -15415 + (LL) 992
1D Compatibility (HY) -43200 + (ID) 11350
Total energy: -314839.0 ( -96.05 by residue)
QMean score : 0.444
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