Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPFVTIQFLEGRTDDQKKALVSEVTEVVSKNLKAPKENIHVILEEMKKTDYGVGGVRKSDI
4OTA Chain:Q ((1-54))
-PIAQIHILEGRSDEQKETLIREVSEAISRSLDAPLTSVRVIITEMAKGHFGIGG------
General information:
TITO was launched using:
RESULT:
Template:
4OTA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14529 for 279 contacts (-52.1/contact) +
2D Compatibility (PS) -6085 + (NN) -3706 + (LL) 664
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -30506.0 ( -109.34 by residue)
QMean score : 0.712
(partial model without unconserved sides chains):
PDB file :
Tito_4OTA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OTA-query.scw
PDB file :
Tito_Scwrl_4OTA.pdb
: