Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAVGLTKASTDFV-DIEIDKPVPENHDLLVKIKAISINPVDTKQREAAKLS-GEEVRILGWDAVGEVVDTGSEVTLFQTGQDVYFAGD-------------------------VTRPGVYAEYTLIDERLVGLKPHNLNVEEAAAMPLTTITAWEALFDRLTITENDKGKSILIINGAGGVGSIATQLAANTGLEVIATASRSETVEWTKSHGANYVINHREN-IPEQLEELGFKKGVDFILCLHNTSAHWDEMQEAIRPQGKICSIVELTEPVEMT--LLKDKSATFSYEFMFTRSKYDTADKIRQHEILTEAAHMLDKGNLTTTLNQVLSPVNAATIEEAHKIISSGKMIGKLVVKGFE |
| 3S2E Chain:A ((3-340)) | MKAAVVRAFGAPLTIDE-VPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLK-VTDTR---PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGG-AHGVLVTA-VSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIR------------GSIVGTRSDLQESLDFAAHGDVKATV-STA-KL--DDVNDVFGRLREGKVEGRVVLDFSR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S2E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189024 for 2752 contacts (-68.7/contact) +
2D Compatibility (PS) -32929 + (NN) -3592 + (LL) 1108
1D Compatibility (HY) -8400 + (ID) 3200
Total energy: -236037.0 ( -85.77 by residue)
QMean score : 0.512
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