Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MASEVTSAKAVAKTVRIAPRKARIVIDLIRGKQVGEAIAILKY--------------------------------TPRSASPIIEKVLKSAIANAEHNYDLDINNLVVEEAFVDEGPTLKRFRPRAQGRASAINKRTSHITVVVSEVKEG
2WWB Chain:I ((10-153))
--NPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLDHQRAIPFRRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAAANAEA-KGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVTEK---
General information:
TITO was launched using:
RESULT:
Template:
2WWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53476 for 763 contacts (-70.1/contact) +
2D Compatibility (PS) -11635 + (NN) 571 + (LL) 268
1D Compatibility (HY) -2000 + (ID) 1650
Total energy: -67922.0 ( -89.02 by residue)
QMean score : 0.417
(partial model without unconserved sides chains):
PDB file :
Tito_2WWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WWB-query.scw
PDB file :
Tito_Scwrl_2WWB.pdb
: