Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKAIFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDPKTEVLLIAGARRQHVVETIRPALAAGKSVLCDRFMDSSLAYQGAGRDMNMEQVLQVNLYAIEDTLPDRTYYLDVPAEVGLARIAANKGREVNRLDKEDITYHEKVQAGYEKVINMFPERFMRVDATKTPEEITETILADILRQLA
4DWJ Chain:D ((28-226))----FITFEGPEGSGKTTVINEVYHRLVK-DYDVIMTREPGGVPTGEEIRKIVLE-GND-MDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKN-SRDQNRLDQEDLKFHEKVIEGYQEIIH---QRFKSVNADQPLENVVEDTYQTIIKYL-


General information:
TITO was launched using:
RESULT:

Template: 4DWJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57380 for 1566 contacts (-36.6/contact) +
2D Compatibility (PS) -21624 + (NN) -10037 + (LL) 1480
1D Compatibility (HY) -18400 + (ID) 4900
Total energy: -110861.0 ( -70.79 by residue)
QMean score : 0.602

(partial model without unconserved sides chains):
PDB file : Tito_4DWJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DWJ-query.scw
PDB file : Tito_Scwrl_4DWJ.pdb: