Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MLLDRVTLEDIEVNLKAEDWREAIQMSARLLLERGAIKESYIDGMIQSVENNGPYIVIAK-HIALAHTRPEFGVIHGGLTFATLADGVAF----GSDMFDPVKLIITLAATDSESHLEVLSELAEVLMDEEKVTRLIEANSSQAFYDELTKEG-
1XIZ Chain:A ((-1-153))
AMQDIHFRRHYVRHLPKEVSQNDIIKALASPLINDGMVVSDFADHVITREQNFPTGLPVEPVGVAIPHTDHKY-VRQNAISVGILAEPVNFEDMGGEPDPVPVRVVFMLALGESNKQLNVLGWIMDVIQDEDFMQQLLVMNDDEIYQSIYTRISE
General information:
TITO was launched using:
RESULT:
Template:
1XIZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84453 for 1125 contacts (-75.1/contact) +
2D Compatibility (PS) -15786 + (NN) -5965 + (LL) -172
1D Compatibility (HY) -8000 + (ID) 1600
Total energy: -115976.0 ( -103.09 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_1XIZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XIZ-query.scw
PDB file :
Tito_Scwrl_1XIZ.pdb
: