Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDNLIRLAEIFDVSLDEHVLAKTNEVKVERIYENKPL-------DLRK--YNKIYWFIFRNIIRSLLIILAILTFL-------------------------------------------------------------------------------------------------------------------------------------- |
2ZB6 Chain:A ((12-462)) | VAAEELMNALSKGNCSGPTTIRGQFSNMSLSLLDLYLGRGYNVSSIVTMTSQGMYGGTYLVEKPNLSQLSMYRVFEVGVIRNPGLGAPVFHMTNYLEQPVSNDLSNCMVALGELKLAALCHGEDSITIPYQGSGKGVSFQLVKLGVWKSPTDMQSWVPLSTDDPVIDRLYLSSHRGVIADNQAKWAVPTTRTDDKLRMETCFQQACKGKIQALCENPEWAPLKDN--RIPSYGVLSVD---LSLTVELKIKIASGFGPLITHGSGMDLYKSNHNNVYWLTIPPMKNLALGVINTLEWIPRFKVSPYLFTVPIKEAGGDCHAPTYLPAEVDGDVKLSSNLVILPGQDLQYVLATYDTSRVEHAVVYYVYSPSRSFSYFYPFRLPIKGVPIELQVECFTWDQKLWCRHFCVLADSESGGHITHSGMVGMGVSCT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZB6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22506 for 266 contacts (-84.6/contact) +
2D Compatibility (PS) -6485 + (NN) 2160 + (LL) 720
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -31461.0 ( -118.27 by residue)
QMean score : 0.174
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