Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRLDKYLKVSR-IIKRRPVAKEVADKGRVKVNGVL-AKSSTDLKLNDQVEIRFGNKLLTVKVLEMKDSTKKEDAIKMYEIINETRIETDEQA
3JAM Chain:E ((46-96))----VFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGK


General information:
TITO was launched using:
RESULT:

Template: 3JAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7939 for 261 contacts (-30.4/contact) +
2D Compatibility (PS) -4953 + (NN) 3313 + (LL) 408
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -11171.0 ( -42.80 by residue)
QMean score : 0.530

(partial model without unconserved sides chains):
PDB file : Tito_3JAM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JAM-query.scw
PDB file : Tito_Scwrl_3JAM.pdb: