Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTNKLKMRETMIAYAFLAPILLFFLIFVFAPMVMGFVTSFFNYSMTQFTFIGLANYNRMFHDSIFMKSLINTVIIVIGSVPVVVFFSLFVAANTYEK-N-------VFSRSFYRCVFFLPVVTGSVAVTVVWKWIYDPMSGILNYILKSGHVIEQNISWLGDKHWALLAIIIILLTTSVGQPIILYIAAMGNIDNSLCEAARVDGANEMQVFWQIKWPSLLPTTLYIAVITTINSFQCFALIQLLTSGGPNYSTSTLMYYLYEKAFKLSEYGYANTMGVFLAVMIALISFAQFKILGNDVEY |
3TUI Chain:A ((7-216)) | ---------------------------------------------------------------WLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLY-VTRPGQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGT---------S------------IGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVG--A-----GGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TUI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197814 for 1581 contacts (-125.1/contact) +
2D Compatibility (PS) -20532 + (NN) -3426 + (LL) 7316
1D Compatibility (HY) -10800 + (ID) 2000
Total energy: -227256.0 ( -143.74 by residue)
QMean score : 0.145
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