Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDFEELFDKVKPIVMKLRRNYFVQLWEYDDWIQEGRIVLFRLLEEHPYLLDNESKLFIYFKTKFSNYLNDVLRHQDCQKRQFNKMPYEEISEVSHYVKSKGLVLDDYIAYRDTLTKVEETLSDIDKEKFEKLISGERFAGKKQFIRDIQPFFNAFKAD
1H3L Chain:A ((33-102))
SARFERDALEFLDQMYSAALRMTRNPADAEDLVQETYAKAYASFHQFRE----GTNLKAWLYRILTNTFINSYR-------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1H3L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36659 for 458 contacts (-80.0/contact) +
2D Compatibility (PS) -7138 + (NN) -863 + (LL) 6276
1D Compatibility (HY) 1600 + (ID) 400
Total energy: -37184.0 ( -81.19 by residue)
QMean score : 0.640
(partial model without unconserved sides chains):
PDB file :
Tito_1H3L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H3L-query.scw
PDB file :
Tito_Scwrl_1H3L.pdb
: