Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKTGILNSHLAKLADDLGHTDRVCIGDLGLPVPNGIPKIDLSLTSGIPSFQEVLDIYLENILVEKVILAEEIKEANPDQLSRLLAKLDNSVSIEYVSHDHLKQMTQDVKAVIRTGENTPYSNIILQSGVII
1OGC Chain:D ((1-131))
MKKHGILNSHLAKILADLGHTDKIVIADAGLPVPDGVLKIDLSLKPGLPAFQDTAAVLAEEMAVEKVIAAAEIKASNQEN-AKFLENLFSEQEIEYLSHEEFKLLTKDAKAVIRTGEFTPYANCILQAGVLF
General information:
TITO was launched using:
RESULT:
Template:
1OGC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77223 for 997 contacts (-77.5/contact) +
2D Compatibility (PS) -14469 + (NN) -9208 + (LL) 176
1D Compatibility (HY) -13200 + (ID) 3700
Total energy: -117624.0 ( -117.98 by residue)
QMean score : 0.701
(partial model without unconserved sides chains):
PDB file :
Tito_1OGC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OGC-query.scw
PDB file :
Tito_Scwrl_1OGC.pdb
: