Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSKQLYKSLPLLTVVLCVGALQQNVEAKAKHYKTTSHVETQYVSTSSKKILPFTHNKQIKVGPLDNLGRATYSHIQLRDADEPKIKRERLTYNPTGWHNYKFTTEKGKTTWLMDRGHLVGYQFSGMNNVPENLVTMTKYLNTGFSENNPDGMLYYENRLDSWLANHKNFWLDYKVTPIYEGNNLVPSRVELQYVGIDKQGKLLEIKLGGGKEQTDEYGVTTVTLENTSPLAKIDYKTGMLIKEDGKQAEEGEDPNSDADENEAAIESASDIEENTNTNTSESDTNNVAPKNRIVYVANKGRSNTYWYSLENIKNANTANIVQMTEQEALNQHKHHSTTEAQ---------- |
| 4AUI Chain:A ((20-327)) | ---DVTLY------------GTIKAGVETSRSVAHHGAQADRVKTATEIADL-----GSKIGFKGQEDLGNGLKAIWQLEQK-------AYVSGTDTGWGN--------RQSFIGLKGGFGKVRVGRLNNILKDTGNFNPW-EGKSYYSGLSNIAQPEERHVSVRYDSPEFAGFSGSVQYVPNDNSGKNRSESYHAGFNYKNDGFFVQYAGSYKR-HNYTTEKHQVHRLVG----GYDHDALYASVAVQQQDAKLTWRDDNSHNSQTEVATTVAYRFG-NVTPRVSYAHGFKGS---VYDADHDNTYDQVVVGAEYDFSKRTSALVSAGWLQKGKGAEKFVATVGGVGLRHKF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AUI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 185234 for 2234 contacts (82.9/contact) +
2D Compatibility (PS) -30280 + (NN) 6140 + (LL) 4060
1D Compatibility (HY) -1200 + (ID) 2150
Total energy: 161804.0 ( 72.43 by residue)
QMean score : -0.009
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