Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLQDQIIKELGVKPVINPSQEIRRSVEFLKDYLLKHSFLKTYVLGISGGQDSTLAGRLAQLAVEELRADTGENYQFIAIRLPYGIQADEEDAQKALDFIKPDIALTINIKE---AVDGQVRALNAAGVEITDFN----KGNIKARQRMISQYAVAGQYAGAVIGTDHAAENITGFFTKFGDGGADLLPLFRLNKSQGKQLLAELGADKALYEKIPTADLEENKPGIADEIALGVTYQEIDAYLEGKVVSDKSRGIIENWWYKGQHKRHLPITIFDDFWK |
3FIU Chain:D ((7-246)) | ----------------FSPKEYSQKLVNWLSDSCMNYP-AEGFVIGLSGGIDSAVA---ASLAVKTGLPTT-------ALILP-SDNNQHQDMQDALELIE-----MLNIEHYTISIQPAYEAFLASTQSFT---QLVIKGNAQARLRMMYLYAYAQQYNRIVIGTDNACEWYMGYFTKFGDGAADILPLVNLKKSQVFELGKYLDVPKNILDKAPSAGLWQ---GQTDEDEMGVTYQEIDDFLDGKQVSAKALERINFWHNRSHHKRKLALTPNF---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -10820 for 1810 contacts (-6.0/contact) +
2D Compatibility (PS) -24441 + (NN) -7551 + (LL) 2528
1D Compatibility (HY) -16400 + (ID) 4850
Total energy: -61534.0 ( -34.00 by residue)
QMean score : 0.398
|
|
|